BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019E10SP1|AL427500
(712 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1127 835 0.0
>3x_Contig1127
Length = 4949
Score = 835 bits (405), Expect = 0.0
Identities = 602/692 (86%), Gaps = 1/692 (0%)
Strand = Plus / Minus
Query: 7 ggatcaatttgaaatttgcaaacatctggtagctaaaawtaawmhwttaactcttaaaaa 66
|||||| ||||||||||||||||| ||||||||| ||| || | |||||||||||
Sbjct: 3757 ggatcagtttgaaatttgcaaacagctggtagctgaaatcaatgctgttactcttaaaaa 3698
Query: 67 tgaaggtacgtkttctgagggagcatggtattsnaactagtaaaaaaaaatttttggagg 126
||||||||||| ||||| |||||||||||||| |||| |||||| ||| ||||||||||
Sbjct: 3697 tgaaggtacgtgttctg-gggagcatggtattggaactggtaaaagaaagtttttggagg 3639
Query: 127 atgaattaggatcaaatactttcgatctaatacsgaaagtaaagttaactataaatccaa 186
|||||||||||||| ||||| |||||||||| | ||||||||||||| ||||| ||||||
Sbjct: 3638 atgaattaggatcagatactgtcgatctaatgcggaaagtaaagttagctatagatccaa 3579
Query: 187 aaaaactgttgaatccagataaartactcaaaatcgatcccttagatcctaataacgaat 246
| | ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||
Sbjct: 3578 agagactgttgaatccagataaagtactcaagatcgatcccttagatcctagtaacgaat 3519
Query: 247 gaaaccaccaaccacaaaaaggaaaaaataccaaamgtgtaaagcctcgtatcctctgaa 306
|||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||
Sbjct: 3518 gaaaccaccaaccacaaaaaggaaaagataccagaggtgtgaagcctcgtatcctctgag 3459
Query: 307 aacrcaatctatagactactaatttattttatttatatacaattaaacttthaataatat 366
||| | ||||||||||||||||||||||||||||||||||| || |||||| ||| ||||
Sbjct: 3458 aacgcgatctatagactactaatttattttatttatatacagttgaacttttaatgatat 3399
Query: 367 tattattactatagtcatcattcattctatcattgccttcratccaaagtgttcatcggc 426
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3398 tattattactatagtcatcattcattctatcattgccttcgatccaaagtgttcatcggc 3339
Query: 427 aatatgattgacaactatmcaammsaatmamttaacaaacctcccacgaacaatcatgtt 486
|||||||||||||||||| ||| ||| | ||||||||||| | ||||||||| |||||
Sbjct: 3338 aatatgattgacaactatccaaccgaatgaattaacaaacctgcgacgaacaatgatgtt 3279
Query: 487 atyatsggaatcaggctgtagctcaacgatgacctttctccaatccattatctcctgcca 546
|| || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 3278 attatgggaatcaggctgtagctcaacgatgacctttctccagtccattgtctcctgcca 3219
Query: 547 ataccttgmtattmgttmttmtttmmtmtggmtmmaatccttaggctatattatmttttt 606
||||||| |||| ||| || ||| | ||| | | | || || |||||||| |||||
Sbjct: 3218 gtaccttgctattcgttcttctttcatatggatcgagtaattgggatatattatcttttt 3159
Query: 607 mamaaamttmttatgtttgtmgtgtttctmtggtaattmttmmggggtataaaaattgta 666
| || || |||||||||| |||||| | |||||||| || |||||||||| ||||
Sbjct: 3158 cacaagcttcttatgtttgtagtgtttatctggtaattcttccggggtataaaccttgtc 3099
Query: 667 atgaataattatgtamgttataatggagggat 698
|||||||||| ||| ||| || |||||||||
Sbjct: 3098 atgaataattctgtccgttctactggagggat 3067
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5487
Number of Sequences: 1807
Number of extensions: 5487
Number of successful extensions: 171
Number of sequences better than 1.0e-20: 1
length of query: 712
length of database: 10,358,551
effective HSP length: 16
effective length of query: 696
effective length of database: 10,329,639
effective search space: 7189428744
effective search space used: 7189428744
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.5 bits)